Best GST Reconciliation Software
Best GST reconciliation software includes ClearTax, GSTZen, Zoho Books, EasyGST, and TaxRaahi GST. Such GST reconciliation tool compares and matches taxpayers' financial records and the information filed with the GST authorities.
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Most Popular GST Reconciliation Software
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List of 20 Best GST Reconciliation Software
Category Champions | 2025
Best GST Reconcile Software for Growing Businesses
Product Description
Zoho Books is an end-to-end GSTR 2A/2B reconciliation software. It helps to generate GSTR1/GSTR2/GSTR3. It helps in accurate reconciliation by matching the GSTR2 to GSTR1. It can also help to provide access to your CA. Read More About Zoho Books
Zoho Books Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Mobile App
- Multi Currency Handling
- Automated Workflows
- Invoicing
- Recurring Transactions
- Client Portal
- Customizable Reports
- Time Tracking
- View all Features
Zoho Books Features and Usability-Based User Satisfaction Score
Category Champions | 2025
Best GSTR 2B reconciliation software for CA & Tax Professionals
Product Description
"EasyGST is the best software for GST reconciliation, invoice, and ITC reconciliation in India. EasyGST software is trusted by thousands of chartered accountants, tax professionals, and corporate users. Download free EasyGST software." Read More About EASYGST
EASYGST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Vendor Management
- Api Integration
- Real Time Data Sync
- Regular Updates
- User Access Control
- Bulk Data Import
- Reconciliation Of Gstr 2a With Purchase Register
- E Way Bill Generation
- View all Features
EasyGST (Light)
$ 40
Per Installation
EasyGST (Professional)
$ 111
Per Installation
EasyGST (Poplular)
$ 54
Per Installation
EASYGST Features and Usability-Based User Satisfaction Score
Category Champions | 2025
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Product Description
TallyPrime is India’s leading business management software for GST, accounting, inventory, banking, and payroll. TallyPrime is affordable and is one of the most popular business management software used by nearly 20 lakh businesses worldwide. Read More About TallyPrime
TallyPrime Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- E Way Bill Generation
- Manufacturing And Bom
- Invoicing And Billing
- Inventory Management
- Mis Reports
- Data Security
- Credit Management
- Tds Management
- View all Features
TallyPrime Silver
$ 313
Full License for Single User
TallyPrime Silver Monthly Subscription
$ 10
Monthly License / Single User
TallyPrime Gold Monthly Subscription
$ 31
Full Monthly License for Multi-User (Easy Renewal)
TallyPrime Features and Usability-Based User Satisfaction Score
Category Champions | 2025
Product Description
ClearTax is a comprehensive GST reconciliation software. It helps in preparing reconciliation for every month, properly validates to file GST returns, helps with multiple GSTINs, makes viewing of 50+ reports easy, etc. Read More About ClearTax
ClearTax Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Gst Filing
- Self Assessment Tax
- Tax Saving Investments
- Business Tax Filing
- Nri Tax Filing
- Hra Exemption Calculator
- Form 16 Upload
- Capital Gains Tax
- View all Features
ClearTax Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
LEGALRAASTA is a trustworthy GST reconciliation software. It helps to serve multiple users under unlimited companies, supports Excel/ERP import, prepares accurate reconciliations, files unlimited returns, etc. Read More About LEGALRAASTA
LEGALRAASTA Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Reconciliation
- Mobile App Access
- Gstin Validation
- User Friendly Interface
- Gst Return Filing
- Customizable Templates
- Invoice Generation
- Audit Trail
- View all Features
LEGALRAASTA Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
TaxRaahi GST reconciliation software helps to reconcile data quickly and accurately. It assists in GST registration, preparing invoices with GST calculations, paying tax, GSTR filing from 1 to 7, and so on. Read More About Taxraahi GST
Taxraahi GST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Client Management
- Gst Compliance
- Multi User Access
- Sales Management
- Purchase Management
- Gst Invoicing
- Gstr 4 Preparation
- Automated Reminders
- View all Features
Yearly
$ 69
Per Year
Taxraahi GST Features and Usability-Based User Satisfaction Score
Software by Udyog Software (India) Ltd
Product Description
uBooks is a SAAS-based GST reconciliation software. It has a POS-enabled billing feature for fast filing. It can file returns in JSON and HTML formats with an inbuilt automatic calculator. It helps in GSTIN validation. Read More About uBOOKS
uBOOKS Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Gstr 2a Reconciliation
- Cloud Backup
- Error Detection
- User Access Control
- Debit Note Reconciliation
- Vendor Management
- Data Security
- Multi Gstin Support
- View all Features
uBOOKS Features and Usability-Based User Satisfaction Score
Contenders | 2025
Product Description
XaTTaX is a GST ITC reconciliation software. It is available on the cloud as well as on-premises. It helps in filing returns, tracking refunds, tax input credits, reconciliation, and tracking unmatched transactions, etc. Read More About XaTTaX
XaTTaX Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Real Time Data Sync
- Integration With Accounting Software
- Customizable Dashboards
- Customer Management
- Invoice Management
- Data Security
- User Access Control
- Vendor Management
- View all Features
XaTTaX GST Software
$ 694
Per Month
XaTTaX Features and Usability-Based User Satisfaction Score
Contenders | 2025
GST Compliance Made Easy with autoTax GST Software
Product Description
autoTax is a GST software. It can import sales data for automatic calculations. It can automatically prepare the GSTR 1 summary, upload it, submit it, and file it. It works seamlessly with Oracle, customers, and many more. Read More About autoTax GST
autoTax GST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Input Tax Credit Reconciliation
- Audit Trail
- Analytics And Insights
- User Role Management
- Customizable Templates
- Tax Rate Management
- E Way Bill Generation
- Automated Reminders
- View all Features
autoTax GST Features and Usability-Based User Satisfaction Score
Emergents | 2025
Software for GST compliance - by GST Edge
Product Description
GST Edge is one of the best GST software in India. It helps in multilevel reconciliation, can manage multiple PANs and GSTINs, resolves mismatched entries quickly, auto-reconciles input tax credits, uploads data in any format, etc. Read More About GST Edge Invoicing & Inventory
GST Edge Invoicing & Inventory Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- User Permissions
- Purchase Orders
- Gst Compliance
- Tax Calculation
- Expense Management
- Recurring Invoices
- Mobile Access
- Multi Currency Support
- View all Features
Annual Plan
$ 82
Per Year
GST Edge Invoicing & Inventory Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
Octa GST is a revolutionary GSTsoftware. It auto calculates the GSTR-9 annual return, consolidates reports of the particular financial year within a blink of an eye, hecks filling status of various returns, etc. Read More About Octa GST
Octa GST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Invoice Management
- Input Tax Credit Management
- Compliance Management
- Integration With Accounting Software
- Mobile Access
- Reconciliation
- Real Time Updates
- Customizable Reports
- View all Features
Standard Subscription
$ 208
Per Year
Premium
$ 417
Per Year
Octa GST Features and Usability-Based User Satisfaction Score
Contenders | 2025
Product Description
GSTHero is a cloud-based GST reconciliation software. It is accurate, provides top security to data, helps in real-time sharing of data with your CA, seamlessly integrates with other accounting software in use, etc. Read More About GSTHero
GSTHero Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Gstr 3b Vs Gstr 2a/2b Comparison
- Customizable Reports
- Auto Reconciliation
- Purchase Register Import
- Cloud Based Platform
- Vendor Communication
- Historical Data Analysis
- Data Security
- View all Features
GSTHero Features and Usability-Based User Satisfaction Score
Emergents | 2025
MyGSTcafe is a Offline GST Compliance and Reconcil
Product Description
myGSTcafe is a GST compliance software. It helps automate many calculations regarding the GST and file accurate returns. It can upload data from your Excel sheets. It provides a one-click reconciliation facility. Read More About myGSTcafe
myGSTcafe Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Multi Gstin Management
- Notification Alerts
- Sales Register
- User Access Control
- Credit/debit Note Management
- Gst Filing
- Invoice Matching
- Gstr 2a Reconciliation
- View all Features
Basic
$ 104
Per Year
myGSTcafe Features and Usability-Based User Satisfaction Score
Contenders | 2025
Software by VERVE Financial Services Private Limited
Product Description
LEDGERS is a cloud-based GST compliance software. It has the ability to reconcile the tax credit and calculate & file GST returns directly. It has GST automated built-in calculators to prepare invoices with GST. Read More About LEDGERS
LEDGERS Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Mismatch Reports
- Gstr 2b Reconciliation
- Data Validation
- Debit Note Reconciliation
- Vendor Reconciliation
- Gstr 1 Reconciliation
- Customizable Reports
- Automated Data Import
- View all Features
Basic
$ 21
Per Year
Standard
$ 40
Per Year
Premium
$ 82
Per Year
LEDGERS Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
earlyGST is a GST compliance software. It helps manage different GSTINs of the company under one login, provides access to multiple users, assists in bulk resolution, notifies of any errors, and so on. Read More About earlyGST
earlyGST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Auto Population Of Data
- Part B Update
- Role Based Access Control
- Mobile App Support
- Mis Reports
- Integration With Erp Systems
- Multi User Support
- Customizable Templates
- View all Features
earlyGST Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
SuperTax is one of the best GST reconciliation software. It seamlessly integrates with your ERP to make calculations faster. It can be used at multiple offices or branches. It helps in filing just in three simple steps. Read More About SuperTax
SuperTax Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Automated Data Import
- Notification Alerts
- Error Identification
- Reconciliation Summary
- Data Validation
- Invoice Matching
- Customizable Reports
- User Friendly Interface
- View all Features
SuperTax Features and Usability-Based User Satisfaction Score
Emergents | 2025
Product Description
SCIGST is a GST return filing, reconciliation, and GST audit software. It can import data from the clients software, prepare returns, reconciliation statements for GSTR 2 (Purchase) and GSTR 2A (Supplier Data), and generate GST annual returns GSTR 9 and ST audit GSTR 9C. Read More About SCIGST
SCIGST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Email Notifications
- Credit Note Reconciliation
- Data Validation
- Gstr 3b Reconciliation
- Debit Note Reconciliation
- Customizable Reports
- Multi Gstin Support
- Invoice Matching
- View all Features
SCIGST Features and Usability-Based User Satisfaction Score
Category Champions | 2025
7x Fastest GST Return Filing & Reconciliation
Product Description
Experience the power of expressGST with a 5-day free trial! GST return filing and reconciliation are 7x faster. Access previous GST notices, compare GSTR1/3B to books, automate 2A/2B mismatch reminders, split/reject ITC, Effortless GST compliance awaits! Read More About ExpressGST
ExpressGST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Automated Reminders
- Email Integration
- Financial Reporting
- Real Time Updates
- Audit Trail
- Customizable Templates
- Invoice Generation
- User Friendly Dashboard
- View all Features
ExpressGST Features and Usability-Based User Satisfaction Score
Category Champions | 2025
Product Description
Marg GST software is useful for every business, be it retail, distribution, or manufacturing. It makes GST billing and filing, generation of E-way bills for transportation business, invoices & 1000's of reports, and management of accounts, reconciliation of bank statements easy. Read More About Marg GST
Marg GST Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Supplier Management
- Email Integration
- Gst Return Filing
- User Access Control
- Data Security
- Financial Reports
- Backup And Restore
- Barcode Management
- View all Features
Basic Edition
$ 113
Full licence/ Single User
Silver Edition
$ 175
Full licence/Single User
Gold Edition
$ 350
Full Licence/ Multi-User
Marg GST Features and Usability-Based User Satisfaction Score
Contenders | 2025
Now file your GSTR within minutes!
Product Description
GST Returns & Reconciliation - Our simple and intuitive dashboard helps customers overcome the fear of managing finances with accurate filing & advanced checkpoints for any errors in data. Read More About LogiTax - GST Return & Reconciliation
LogiTax - GST Return & Reconciliation Is Tailored For
StartUps
SMBs
Mid-Market
Enterprises
Features
- Gst Compliance Dashboard
- Multi User Access
- Automated Gst Return Filing
- Secure Data Storage
- Invoice Management
- Multi Company Support
- Audit Trail
- User Friendly Interface
- View all Features
LogiTax - GST Return & Reconciliation Features and Usability-Based User Satisfaction Score
Get Free Expert Advice
What is GST Reconciliation Software?
GST reconciliation software is a specialized solution designed for Indian businesses that enable them to detect mismatches between sales and returns data. As a result, they ensure proper filing of GST returns while saving time and ensuring compliance.
GST reconciliation software helps businesses detect mismatches in the taxpayer's GSTR 2A and GSTR 3B. The GSTR 2A is the summary of the transaction of the taxpayer with their vendors as recorded in the vendors’ GSTR 1. Similarly, GSTR 3B is the summary of the same transaction recorded by the taxpayer. These two records should ideally be the same as they show the same transaction; however, there may be some discrepancies between the two because of the following reasons:
-
Error in Recording
This is when there is an error while recording the total amount of the invoice, tax amount, HSN code, or the item description of the product. This error can be due to either of the parties involved. The GSTR 2A/2B reconciliation software helps both parties to assess the situation to ascertain which account shows the mistake and to rectify it.
-
Error in Reporting
This is when either of the two GSTRs, GSTR 2A or GSTR 3B, shows a transaction that is not recorded on the return end. A missing transaction in GSTR 2A means that the vendor has not recorded it in their accounts. In contrast, a missing transaction in GSTR 3B signifies that the transaction has not been recorded in the taxpayer’s account. This may be a result of the products being in transit. Account reconciliation software helps to detect such missing records and notify the parties so that they can record the transactions in their respective accounts.
Additionally, the GST reconciliation software also helps to detect any discrepancies between GSTR 3B and GSTR 1, which is the summary of the taxpayer’s sales. The data reconciliation software helps you rectify the discrepancies by accepting the records as shown in the GSTR 2A or by reporting the discrepancies to the vendor so that they can change their records.
What are the Benefits of Using GST Reconciliation Tools?
Using GST reconciliation software solutions for cross-checking the different GSTRs helps businesses in various ways. Some of the benefits of using GST reconciliation software are:
- It saves the time of the employees by automatically cross-checking the data quickly and efficiently, eliminating the need to hire a professional.
- The account reconciliation software eases the communication between the taxpayer and the vendors by sending the reports of discrepancies automatically.
- The reconciliation software tools sieve through the large data in a precise and efficient manner, thereby reducing any chances of error in reconciliation.
- The GSTR 2B reconciliation software helps to reconcile the data recorded in the taxpayer's accounts with the various vendors to ensure that there is no error in recording the transactions by any parties, as well as to account for the goods in transition and Reconcile transitional ITC.
- The automated reconciliation software helps businesses to claim the correct amount of Input Tax Credit and to detect any fraud or incorrect transactions as recorded by the vendor. This helps to minimize the overall risk of fraud by either party.
- Moreover, the data reconciliation software also helps to cross-check GSTR 1 with GSTR 3B and other related documents, such as shipping bills which are submitted on ICEGATE in case of export, thus ensuring that all the data presented by the taxpayer is correct.
Besides ensuring compliance, saving time, and reducing paperwork, GST reconciliation software helps businesses in the following areas:
- Electronic filing of dealer returns
- GST Invoice & ITC Report Generation
- Reconciliation with the online portal
- Maintenance of credit and cash ledgers
- Digitizing tax liability registers
- Electronic payment of taxes
What are the Features of GSTR 2A/2B Reconciliation Software?
Before choosing the best GST Reconciliation Software for your business from among the various GST reconciliation software solutions available in the market, there are some features that you should not compromise on. These pertinent features include:
- The account reconciliation software should be able to manage large numbers of vendors and data. It should also be able to handle any significant expansion in the business.
- There should be a seamless transfer of data from the ERP and other data sources to the GST reconciliation software and vice versa.
- The automated reconciliation software should be able to provide detailed reports of any error along with insights on how to manage them.
- Since the reconciliation process would need to be done every month, the GST reconciliation software tools should be quick and efficient so that they do not affect the day-to-day working of the business and can promptly meet the deadlines without any help from the workforce.
- The GST reconciliation tools should enable collaboration and data sharing between the owner and management of the business and the accounting team.
- The software should also be able to adapt to changes as per the GST Act or Regulations through automated (preferred) or manual updates so that the returns filed by the business are always in compliance with the applicable rules and regulations.
- The payment reconciliation software tools should be very sensitive to detect any error, however minute, and its cause correctly.
- The GSTR 2A reconciliation software should have an adequate support team to address problems and provide solutions or alternatives.
- Additionally, the software should also support offline mode.
Though this list contains the major features that GST reconciliation software must have, it is not exhaustive. Before choosing best software for GST reconciliation, you should determine the needs and nature of the business, its vendors, size, and other such factors that may affect the efficiency of the account reconciliation software.
If possible, get a one-on-one consultation with the software providers to learn about the various available software. Then, make an educated decision while purchasing GSTR 2A reconciliation software for your business.
Most of the GSTR 2B reconciliation software has a demo period during which you can judge the performance, efficiency, ease of use, and suitability of the software. Once you find the perfect fit for your business in terms of features, performance, and cost, you can start using it to apply for the Input Tax Credit without any hassle.
Latest Trends of GST Reconciliation Software
Since the beginning of 2020, there have been several changes in GST regulations, from e-invoicing to the introduction of the QMRP scheme. In addition, businesses with a monthly turnover exceeding 50 lacks have been mandated to pay 1% of their GST amount in cash. These and several other changes in government guidelines have forced many to opt for specialized GST filing software.
Modern GST return software can automatically populate your GST details once you provide your GSTN number. A few such solutions can also calculate GST details on each transaction, simplifying daily business dealings while ensuring compliance. Besides reconciling accounts, most GST reconciliation software can compute returns based on both the old and new GST guidelines.
Most GST return software today is SaaS-based, allowing users to interact directly with the government portal. Besides offering top-notch security and a host of payment options, such tools also have advanced analytics and reporting features that continuously assess your organization’s financial health.
FAQs
How can I do GST reconciliation in Excel?
To do a GST reconciliation in Excel without using GST reconciliation software, following the steps below:
- Add your GSTR-2A data into the 'B2B from GSTN' sheet for multiple months
- Input your Purchase Register details in a separate sheet
- Right-click and click on the Reconcile Now button.
What is the cost of GST reconciliation software?
The cost of GST reconciliation software may alter significantly based on the features provided. However, the basic version of most government-backed GST solutions is completely free. Also, the total cost of GST returns software will depend on the number of users in your firm and the payment plan that matches your needs.
How to work on GST reconciliation?
To work on GST reconciliation, here are a few steps to follow:
- Claim ITCs belonging to a relevant financial year on your GST filing software
- Match the Table of exports at 6A of GSTR-1 vis-a-vis the corresponding declarations provided in GSTR-3B
- Matching the Table of exports at 6A of GSTR-1 vis-a-vis the details of inventory/ shipping bills submitted on ICEGATE.
- Compare Annual Income Tax Return with Annual GST returns